Thanks very much for all the comments. I appreciate it. Based on the comments, there seems to be some misconceptions about how the IntellipH actually operates.
1. The IntellipH does not measure anything. Only the IntelliChem does that. And, as I understand from reading many of the threads on TFP, there are all sorts of ORP sensor issues with the IntelliChem that I won't get into here. That is why I opted for the IntellipH versus the IntelliChem.
2. So, simply, there are three major components to the IntellipH. The acid tank, the peristaltic pump and the control panel. When an IntelliChlor is present as in my case, the control panel can be used to control the IntelliChlor as well but forget this feature. I perform IntelliChlor functions through the automation.
3. The IntelliChlor power/control cable passes through the IntellipH control panel. The IntellipH uses the IntelliChlor transformer (located in the automation load center) for power and then passes that power to the IntelliChlor cell. I can certainly change the fact that the IntelliChlor power and control pass through the IntellipH control panel. Essentially "separating them" as
@Jimrahbe points out above. That's pretty doable. So instead of the two being wired together in series, each device would draw it's power from the transformer individually and the RS-485 signals for the IntelliChlor would no longer 'pass through" the IntellipH controller. BUT.... That now presents another hurdle that I need to get over.
That stupid IntellipH controller uses the IntelliChlors' flow switch somehow to determine if water is being pumped through the system. Somehow, that is why I have to perform manual overide dosing in the winter when the IntelliChlor cell temperature flow/temp sensor will not allow the IntelliChlor to generate.
This "issue" was touched on by
@Jimrahbe here:
Anyone know how to get the IntelliPH working without an IntelliChlor attached (do have the controller for the IntelliChlor, but won't auto feed the IntelliPH without IntelliChlor).
www.troublefreepool.com
and
@Dirk, here:
The tank is flush with the base except where the pump is located. That width is very close to 17”. Also, to the other question, yes, you need an Intellichlor to operate the IntellipH.
www.troublefreepool.com
4. Okay, with that said. Let's assume that IntellipH power is ONLY energized when the IntelliChlor transformer is energized (which of course means that the filter pump is operating), and I have somehow tricked the the ipH into believing that it has an operating IntelliChlor. Great.
5. Currently, if I want to change (+/-) the despensing amount (how many seconds the controller tells the p. pump to run), in either manual mode or auto mode, I have to walk out to the pad, insure the filter pump circuit is ON, (so there is power to the ipH controller) and make the change on the ipH controller.
6. Also, if I want to do a "manual dosing" (I currently have to do this in the winter when water temp prevents the IntelliChlor cell from operating), I also have to do this at the ipH controller.
7. Those are the two things that I would like to do remotely (from my desktop or an iPhone app).
I had already suspected that I might need to "separate" the way the IntelliChlor and the IpH are wired together. But need to find a way to trick the ipH into believing there is an operating IntelliChlor. Hmmmm

Again, auto mode will only work when the ipH controller gets the right information from the IntelliChlor cell. That is specifically the reason I'm sure that the IntellipH listens on the bus for certain packets, but it does not send out any packets.
If anyone is interested, or has any question regarding how all this kind of works, the manual can be found here:
IntellipH Acid Dispenser System Installation and User’s Guide
In summary, the challenges are:
1. Perform a manual dosing remotely without having to do it at the ipH control panel.
2. Increase or decrease the dispense amount (how many seconds the pump doses), when in auto or manual mode, again remotely without having to perform this function at the ipH control panel.
3. And lastly, find a way to let the ipH controller think the IC-60 is operating normally, so that auto mode dosing is possible if separation of the two units are mandatory. If I can perform challenges 1 and 2 above without separation, then so much the better. I thought about using a dummy plug in the ipH controller where the IC-60 plugs in as suggested I think by Dirk, but not sure it's as simple as that. I think that those RS-485 packets that the ipH is listening for, are coming from the IC-60 but not 100% convinced of that. Some testing is warranted on this issue.
r.