I just got rid of a SEVERE case of mustard algae. Here is what I learned. Forget the yellow out type of stuff. That will cost unnecessary money, waste your time, and mess your pool water chemestry up. Unfortunately there are no easy inexpensive ways to do it (because of chlorine prices), BUT ITS VERY DOABLE. Make sure your filter is good and clean first. Changing the media is best. Then try to get your PH on the low end at 7.2 because chlorine loses some of its punch the more the PH goes up. Make sure your TA, and CH are acceptable and know your CYA for obvious reasons. Go buy you 20 or 30 gallons of the Essentials 10% Chlorine at Wal Mart $100 - $150. Heres the most imortant thing: As long as you have visible mustard algae VACUME TO WASTE EVERY DAY. Trust me, this is BIG. If you are vacumming to filter you are keeping billions of live and dead algae in your system which just exasperates the problem. GET RID OF THEM. So fill your pool each night to its capacity and vacume to waste once a day. Sure you lose a little chlorine but the offset of getting that algae out is more than enough to compensate, plus the exchange of water is lowering your CYA and making your chlorine more effective. The second most important thing is BRUSH, BRUSH, BRUSH. Every day at least twice a day and more if you can. The brushing breaks them away from their clinging ways and they cant live suspended in the water with the chlorine, this is why you BACKWASH every day as needed to get those that died (in suspension) out of your filter. Mustard algae are invisibly small but think of them as having sharp claws that dig in and cling to your liner. Then think of them having a shell on their back that protects them from the chlorine while they are hunkered down. When you brush you are knocking away layers of them, but as long as there are a few left clinging they will breed. Their offspring are the "new" brownish dust you brush up every day but (DONT BRUSH THEM UP). Vacume those offspring to waste then brush the invisible clingers peeling more of them away and weakening the ones that are left. Do all these things daily while keeping your FC above mustard shock level and you will rid your pool of them. After 4 or 5 days when things look better DONT SLACK OFF. Look very closely and find those problem spots where they are still hanging on. While still brushing and keeping your FC at mustard shock level take a rag and soak it with chlorine. Wad it up and throw it in the pool pushing it down to the problem spot and putting something on it to hold it in that spot overnight. Either this or you can shake powder shock and let a small pile fall and lay on top of the problem spot. Just find some way of concentrating chlorine on your small problem areas for a day or two while brushing and keeping FC levels up. Do these things and in a week you will have no more mustard algae.